Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Gm3854A0A1B0GSS6 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Gm3854A0A1B0GSS6 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm3854A0A1B0GSS6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Gm3854A0A1B0GSS6 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm3854A0A1B0GSS6 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Gm3854A0A1B0GSS6 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm3854A0A1B0GSS6 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm3854A0A1B0GSS6 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.49□□□□□ -0.25
Gm3854A0A1B0GSS6 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Gm13342-201ENSMUST00000121055 207 ntBASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Gm7029-201ENSMUST00000173226 450 ntBASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Gm44364-201ENSMUST00000198368 141 ntBASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Gm18935-201ENSMUST00000212692 664 ntBASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm3854A0A1B0GSS6 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Gm13123-201ENSMUST00000122173 492 ntBASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Gm7783-201ENSMUST00000204795 781 ntBASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Gm24526-201ENSMUST00000082921 158 ntBASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3854A0A1B0GSS6 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm3854A0A1B0GSS6 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Gm3854A0A1B0GSS6 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Gm3854A0A1B0GSS6 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.46□□□□□ -0.25
Gm3854A0A1B0GSS6 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm3854A0A1B0GSS6 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm3854A0A1B0GSS6 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Gm3854A0A1B0GSS6 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Gm3854A0A1B0GSS6 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Gm3854A0A1B0GSS6 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Gm3854A0A1B0GSS6 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm3854A0A1B0GSS6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms