Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Cfap99A0A140LIX9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap99A0A140LIX9 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap99A0A140LIX9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
Cfap99A0A140LIX9 Gm14660-201ENSMUST00000119809 575 ntBASIC16.15■□□□□ 0.18
Cfap99A0A140LIX9 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
Cfap99A0A140LIX9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.15■□□□□ 0.18
Cfap99A0A140LIX9 Gm27731-201ENSMUST00000185192 107 ntBASIC16.15■□□□□ 0.18
Cfap99A0A140LIX9 Gm29649-201ENSMUST00000185649 419 ntBASIC16.15■□□□□ 0.18
Cfap99A0A140LIX9 Gm42693-201ENSMUST00000196779 631 ntBASIC16.15■□□□□ 0.18
Cfap99A0A140LIX9 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.15■□□□□ 0.18
Cfap99A0A140LIX9 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap99A0A140LIX9 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap99A0A140LIX9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap99A0A140LIX9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap99A0A140LIX9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap99A0A140LIX9 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cfap99A0A140LIX9 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap99A0A140LIX9 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap99A0A140LIX9 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cfap99A0A140LIX9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap99A0A140LIX9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cfap99A0A140LIX9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cfap99A0A140LIX9 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cfap99A0A140LIX9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Gm8927-201ENSMUST00000181978 981 ntBASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Gm27772-201ENSMUST00000184900 187 ntBASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Gm3222-201ENSMUST00000071282 990 ntBASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Gm6091-201ENSMUST00000098307 165 ntBASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.14■□□□□ 0.17
Cfap99A0A140LIX9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 AC140451.2-201ENSMUST00000228030 664 ntBASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap99A0A140LIX9 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms