Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trav18A0A075B656 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.09□□□□□ -0.63
Trav18A0A075B656 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.09□□□□□ -0.63
Trav18A0A075B656 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.09□□□□□ -0.63
Trav18A0A075B656 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav18A0A075B656 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.08□□□□□ -0.64
Trav18A0A075B656 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Gm25948-201ENSMUST00000175334 112 ntBASIC11.08□□□□□ -0.64
Trav18A0A075B656 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Gm38294-201ENSMUST00000192831 381 ntBASIC11.08□□□□□ -0.64
Trav18A0A075B656 Gm2756-201ENSMUST00000195851 400 ntBASIC11.08□□□□□ -0.64
Trav18A0A075B656 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.08□□□□□ -0.64
Trav18A0A075B656 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav18A0A075B656 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav18A0A075B656 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.07□□□□□ -0.64
Trav18A0A075B656 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.07□□□□□ -0.64
Trav18A0A075B656 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Gm25144-201ENSMUST00000179561 110 ntBASIC11.07□□□□□ -0.64
Trav18A0A075B656 Gm25352-201ENSMUST00000179815 110 ntBASIC11.07□□□□□ -0.64
Trav18A0A075B656 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Gm27702-201ENSMUST00000184512 56 ntBASIC11.07□□□□□ -0.64
Trav18A0A075B656 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.07□□□□□ -0.64
Trav18A0A075B656 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms