Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Gm25144-201ENSMUST00000179561 110 ntBASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Gm25352-201ENSMUST00000179815 110 ntBASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Gm27622-201ENSMUST00000183779 60 ntBASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Gm27430-201ENSMUST00000184585 107 ntBASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Gm44333-201ENSMUST00000197168 107 ntBASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Shd-206ENSMUST00000225145 998 ntBASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Gm12428-201ENSMUST00000119844 727 ntBASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Gm6736-201ENSMUST00000166583 948 ntBASIC12.19□□□□□ -0.46
H2afb3S4R1G7 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.19□□□□□ -0.46
H2afb3S4R1G7 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Gm5425-201ENSMUST00000214125 459 ntBASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
H2afb3S4R1G7 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.18□□□□□ -0.46
H2afb3S4R1G7 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms