Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Gm29667-201ENSMUST00000190817 490 ntBASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Gm24420-201ENSMUST00000176676 59 ntBASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ClcnkaQ9WUB7 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ClcnkaQ9WUB7 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms