Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn8aQ9WTU3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.52□□□□□ -0.25
Scn8aQ9WTU3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn8aQ9WTU3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Scn8aQ9WTU3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn8aQ9WTU3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Scn8aQ9WTU3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Scn8aQ9WTU3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn8aQ9WTU3 Gm12957-201ENSMUST00000117835 377 ntBASIC13.52□□□□□ -0.25
Scn8aQ9WTU3 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Scn8aQ9WTU3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.52□□□□□ -0.25
Scn8aQ9WTU3 Gm43133-201ENSMUST00000197472 463 ntBASIC13.52□□□□□ -0.25
Scn8aQ9WTU3 Gm44069-201ENSMUST00000204898 506 ntBASIC13.52□□□□□ -0.25
Scn8aQ9WTU3 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.52□□□□□ -0.25
Scn8aQ9WTU3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn8aQ9WTU3 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Scn8aQ9WTU3 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn8aQ9WTU3 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.52□□□□□ -0.25
Scn8aQ9WTU3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.52□□□□□ -0.25
Scn8aQ9WTU3 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn8aQ9WTU3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn8aQ9WTU3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn8aQ9WTU3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.52□□□□□ -0.25
Scn8aQ9WTU3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Gm40466-201ENSMUST00000212174 422 ntBASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Gm9899-201ENSMUST00000065519 555 ntBASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn8aQ9WTU3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Gm11637-201ENSMUST00000120601 592 ntBASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Gm22121-201ENSMUST00000175148 54 ntBASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Mir7221-201ENSMUST00000184009 72 ntBASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Gm37042-201ENSMUST00000193816 581 ntBASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Gm18054-201ENSMUST00000207539 555 ntBASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scn8aQ9WTU3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms