Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Gm12341-201ENSMUST00000119724 503 ntBASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Gm12138-201ENSMUST00000122180 951 ntBASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clcf1Q9QZM3 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Gm8927-201ENSMUST00000181978 981 ntBASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Gm3222-201ENSMUST00000071282 990 ntBASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Mir497b-201ENSMUST00000093601 125 ntBASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Clcf1Q9QZM3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Gm8584-201ENSMUST00000171982 758 ntBASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Gm24420-201ENSMUST00000176676 59 ntBASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Gm45384-201ENSMUST00000210451 277 ntBASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clcf1Q9QZM3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms