Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco4Q9JIS3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Gm13559-201ENSMUST00000120476 863 ntBASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 AC153794.1-201ENSMUST00000169148 126 ntBASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Gm20472-201ENSMUST00000174403 1240 ntBASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Gm7889-201ENSMUST00000185591 958 ntBASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smco4Q9JIS3 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Gm9347-201ENSMUST00000211473 1607 ntBASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Smco4Q9JIS3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms