Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.05■□□□□ 0.16
Ube3bQ9ES34 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube3bQ9ES34 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube3bQ9ES34 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.05■□□□□ 0.16
Ube3bQ9ES34 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ube3bQ9ES34 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube3bQ9ES34 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.05■□□□□ 0.16
Ube3bQ9ES34 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Gm21156-201ENSMUST00000189693 869 ntBASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Gm37102-201ENSMUST00000195740 1105 ntBASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3bQ9ES34 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Mir1982-201ENSMUST00000157368 74 ntBASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Gm27331-201ENSMUST00000183705 60 ntBASIC16.03■□□□□ 0.16
Ube3bQ9ES34 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3bQ9ES34 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube3bQ9ES34 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube3bQ9ES34 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.02■□□□□ 0.16
Ube3bQ9ES34 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Ube3bQ9ES34 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.02■□□□□ 0.16
Ube3bQ9ES34 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube3bQ9ES34 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube3bQ9ES34 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube3bQ9ES34 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ube3bQ9ES34 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ube3bQ9ES34 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube3bQ9ES34 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube3bQ9ES34 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.02■□□□□ 0.16
Ube3bQ9ES34 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.02■□□□□ 0.16
Ube3bQ9ES34 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Ube3bQ9ES34 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Ube3bQ9ES34 Gm13226-201ENSMUST00000117838 404 ntBASIC16.02■□□□□ 0.16
Ube3bQ9ES34 Gm12203-201ENSMUST00000118235 598 ntBASIC16.02■□□□□ 0.16
Ube3bQ9ES34 Gm12209-201ENSMUST00000120089 596 ntBASIC16.02■□□□□ 0.16
Ube3bQ9ES34 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ube3bQ9ES34 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ube3bQ9ES34 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC16.02■□□□□ 0.16
Ube3bQ9ES34 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC16.02■□□□□ 0.16
Ube3bQ9ES34 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC16.02■□□□□ 0.16
Ube3bQ9ES34 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC16.02■□□□□ 0.16
Ube3bQ9ES34 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms