Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Gm27741-201ENSMUST00000185060 237 ntBASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.99□□□□□ -0.33
Ube4bQ9ES00 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ube4bQ9ES00 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.97□□□□□ -0.33
Ube4bQ9ES00 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.97□□□□□ -0.33
Ube4bQ9ES00 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms