Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdc40Q9DC48 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdc40Q9DC48 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdc40Q9DC48 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cdc40Q9DC48 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Gm4804-201ENSMUST00000182234 999 ntBASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Gm44719-201ENSMUST00000206404 149 ntBASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdc40Q9DC48 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cdc40Q9DC48 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cdc40Q9DC48 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdc40Q9DC48 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Gm5354-201ENSMUST00000182417 973 ntBASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms