Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Gm14928-201ENSMUST00000120198 477 ntBASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Gm23984-201ENSMUST00000157139 203 ntBASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Gm5354-201ENSMUST00000182417 973 ntBASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Mir6392-201ENSMUST00000184924 108 ntBASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Gm19220-201ENSMUST00000222682 803 ntBASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Gm12485-201ENSMUST00000119641 291 ntBASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Gm15376-201ENSMUST00000122258 783 ntBASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Gm27772-201ENSMUST00000184900 187 ntBASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Gm18624-201ENSMUST00000220966 658 ntBASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2aQ9DB34 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Gm15770-201ENSMUST00000117498 584 ntBASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Gm12341-201ENSMUST00000119724 503 ntBASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Gm12091-201ENSMUST00000146791 830 ntBASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Matn2-206ENSMUST00000228570 2798 ntBASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms