Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ssmem1Q9D9Y8 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Ssmem1Q9D9Y8 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ssmem1Q9D9Y8 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.7□□□□□ -0.54
Ssmem1Q9D9Y8 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ssmem1Q9D9Y8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ssmem1Q9D9Y8 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.7□□□□□ -0.54
Ssmem1Q9D9Y8 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ssmem1Q9D9Y8 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ssmem1Q9D9Y8 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ssmem1Q9D9Y8 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Gm9002-201ENSMUST00000178437 499 ntBASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Gm38144-201ENSMUST00000192790 465 ntBASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Gm42550-201ENSMUST00000201553 960 ntBASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ssmem1Q9D9Y8 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Gm13689-201ENSMUST00000119360 685 ntBASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Gm15806-201ENSMUST00000120696 955 ntBASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Gm44397-201ENSMUST00000195950 113 ntBASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssmem1Q9D9Y8 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Ssmem1Q9D9Y8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ssmem1Q9D9Y8 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssmem1Q9D9Y8 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms