Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm30238-201ENSMUST00000195528 2603 ntBASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Syt7-204ENSMUST00000223586 1344 ntBASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Gm13886-201ENSMUST00000117876 1183 ntBASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp4bQ9D8B3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Gm12485-201ENSMUST00000119641 291 ntBASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Gm15321-201ENSMUST00000121290 288 ntBASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Gm45003-201ENSMUST00000205875 2158 ntBASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp4bQ9D8B3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp4bQ9D8B3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp4bQ9D8B3 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp4bQ9D8B3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp4bQ9D8B3 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp4bQ9D8B3 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp4bQ9D8B3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp4bQ9D8B3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp4bQ9D8B3 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp4bQ9D8B3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC17.02■□□□□ 0.32
Chmp4bQ9D8B3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp4bQ9D8B3 Gm11524-201ENSMUST00000119349 807 ntBASIC17.02■□□□□ 0.32
Chmp4bQ9D8B3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp4bQ9D8B3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Chmp4bQ9D8B3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Chmp4bQ9D8B3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp4bQ9D8B3 Gm28760-201ENSMUST00000185995 736 ntBASIC17.02■□□□□ 0.32
Chmp4bQ9D8B3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp4bQ9D8B3 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.02■□□□□ 0.32
Chmp4bQ9D8B3 Gm4782-201ENSMUST00000168705 2046 ntBASIC17.02■□□□□ 0.32
Chmp4bQ9D8B3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp4bQ9D8B3 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp4bQ9D8B3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp4bQ9D8B3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp4bQ9D8B3 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp4bQ9D8B3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp4bQ9D8B3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp4bQ9D8B3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp4bQ9D8B3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp4bQ9D8B3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp4bQ9D8B3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp4bQ9D8B3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp4bQ9D8B3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp4bQ9D8B3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 121.5 ms