Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
U2af1Q9D883 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
U2af1Q9D883 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2af1Q9D883 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2af1Q9D883 AC159649.2-201ENSMUST00000222984 3223 ntBASIC17.77■□□□□ 0.44
U2af1Q9D883 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2af1Q9D883 Gm5303-201ENSMUST00000117943 1252 ntBASIC17.77■□□□□ 0.44
U2af1Q9D883 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC17.77■□□□□ 0.44
U2af1Q9D883 Gm17150-201ENSMUST00000165577 381 ntBASIC17.77■□□□□ 0.44
U2af1Q9D883 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2af1Q9D883 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC17.77■□□□□ 0.44
U2af1Q9D883 Gm8652-201ENSMUST00000181363 964 ntBASIC17.77■□□□□ 0.44
U2af1Q9D883 Gm37748-201ENSMUST00000194379 1140 ntBASIC17.77■□□□□ 0.44
U2af1Q9D883 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2af1Q9D883 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2af1Q9D883 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
U2af1Q9D883 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
U2af1Q9D883 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
U2af1Q9D883 Gm9755-201ENSMUST00000032981 1356 ntBASIC17.77■□□□□ 0.43
U2af1Q9D883 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
U2af1Q9D883 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
U2af1Q9D883 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC17.77■□□□□ 0.43
U2af1Q9D883 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
U2af1Q9D883 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
U2af1Q9D883 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
U2af1Q9D883 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2af1Q9D883 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2af1Q9D883 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2af1Q9D883 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2af1Q9D883 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
U2af1Q9D883 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2af1Q9D883 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
U2af1Q9D883 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2af1Q9D883 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2af1Q9D883 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2af1Q9D883 Gm13612-201ENSMUST00000119276 390 ntBASIC17.76■□□□□ 0.43
U2af1Q9D883 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC17.76■□□□□ 0.43
U2af1Q9D883 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC17.76■□□□□ 0.43
U2af1Q9D883 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC17.76■□□□□ 0.43
U2af1Q9D883 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC17.76■□□□□ 0.43
U2af1Q9D883 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
U2af1Q9D883 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2af1Q9D883 Gm44799-201ENSMUST00000207639 1202 ntBASIC17.76■□□□□ 0.43
U2af1Q9D883 Gm18473-201ENSMUST00000220543 868 ntBASIC17.76■□□□□ 0.43
U2af1Q9D883 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2af1Q9D883 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
U2af1Q9D883 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2af1Q9D883 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2af1Q9D883 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2af1Q9D883 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2af1Q9D883 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
U2af1Q9D883 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2af1Q9D883 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2af1Q9D883 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2af1Q9D883 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2af1Q9D883 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
U2af1Q9D883 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Gm6152-201ENSMUST00000151704 340 ntBASIC17.75■□□□□ 0.43
U2af1Q9D883 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC17.75■□□□□ 0.43
U2af1Q9D883 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Cdk7-205ENSMUST00000225990 1159 ntBASIC17.75■□□□□ 0.43
U2af1Q9D883 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
U2af1Q9D883 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC17.75■□□□□ 0.43
U2af1Q9D883 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
U2af1Q9D883 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2af1Q9D883 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
U2af1Q9D883 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC17.74■□□□□ 0.43
U2af1Q9D883 Gm10040-201ENSMUST00000080726 1662 ntBASIC17.74■□□□□ 0.43
U2af1Q9D883 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
U2af1Q9D883 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
U2af1Q9D883 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
U2af1Q9D883 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
U2af1Q9D883 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
U2af1Q9D883 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
U2af1Q9D883 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
U2af1Q9D883 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
U2af1Q9D883 AC166491.1-201ENSMUST00000227053 2308 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms