Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Gm13689-201ENSMUST00000119360 685 ntBASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Gm38144-201ENSMUST00000192790 465 ntBASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Gm38223-201ENSMUST00000194484 695 ntBASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Gm42550-201ENSMUST00000201553 960 ntBASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Acot6-202ENSMUST00000222921 3622 ntBASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.86□□□□□ -0.51
Tmem54Q9D7S1 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Gm15678-201ENSMUST00000117573 960 ntBASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Gm7063-201ENSMUST00000186840 981 ntBASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Gm6745-201ENSMUST00000199216 526 ntBASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.85□□□□□ -0.51
Tmem54Q9D7S1 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Tmem54Q9D7S1 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Tmem54Q9D7S1 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Tmem54Q9D7S1 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem54Q9D7S1 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem54Q9D7S1 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem54Q9D7S1 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem54Q9D7S1 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem54Q9D7S1 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tmem54Q9D7S1 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Tmem54Q9D7S1 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms