Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc7Q9D541 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Ccdc7Q9D541 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc7Q9D541 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc7Q9D541 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.83■□□□□ 0.12
Ccdc7Q9D541 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc7Q9D541 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.83■□□□□ 0.12
Ccdc7Q9D541 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc7Q9D541 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc7Q9D541 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.83■□□□□ 0.12
Ccdc7Q9D541 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc7Q9D541 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc7Q9D541 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Ccdc7Q9D541 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc7Q9D541 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Ccdc7Q9D541 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc7Q9D541 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc7Q9D541 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc7Q9D541 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc7Q9D541 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc7Q9D541 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Gm5161-201ENSMUST00000075243 853 ntBASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.82■□□□□ 0.12
Ccdc7Q9D541 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.81■□□□□ 0.12
Ccdc7Q9D541 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
Ccdc7Q9D541 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc7Q9D541 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc7Q9D541 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc7Q9D541 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc7Q9D541 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc7Q9D541 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc7Q9D541 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc7Q9D541 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc7Q9D541 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.8■□□□□ 0.12
Ccdc7Q9D541 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc7Q9D541 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc7Q9D541 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc7Q9D541 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.8■□□□□ 0.12
Ccdc7Q9D541 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc7Q9D541 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms