Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Gm5364-201ENSMUST00000216789 889 ntBASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Raet1eQ9CZQ6 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Raet1eQ9CZQ6 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Raet1eQ9CZQ6 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1eQ9CZQ6 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.85□□□□□ -0.51
Raet1eQ9CZQ6 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1eQ9CZQ6 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1eQ9CZQ6 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1eQ9CZQ6 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1eQ9CZQ6 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1eQ9CZQ6 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1eQ9CZQ6 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1eQ9CZQ6 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1eQ9CZQ6 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1eQ9CZQ6 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1eQ9CZQ6 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Raet1eQ9CZQ6 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Raet1eQ9CZQ6 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1eQ9CZQ6 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms