Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Gm12585-201ENSMUST00000117307 290 ntBASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt2Q9CZN7 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Gm27838-201ENSMUST00000184829 128 ntBASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Gm18027-201ENSMUST00000218947 619 ntBASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Shmt2Q9CZN7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.93□□□□□ -0.34
Shmt2Q9CZN7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt2Q9CZN7 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt2Q9CZN7 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt2Q9CZN7 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt2Q9CZN7 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt2Q9CZN7 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Shmt2Q9CZN7 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.93□□□□□ -0.34
Shmt2Q9CZN7 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.93□□□□□ -0.34
Shmt2Q9CZN7 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt2Q9CZN7 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.93□□□□□ -0.34
Shmt2Q9CZN7 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.93□□□□□ -0.34
Shmt2Q9CZN7 Gm4875-201ENSMUST00000118257 786 ntBASIC12.93□□□□□ -0.34
Shmt2Q9CZN7 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.93□□□□□ -0.34
Shmt2Q9CZN7 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.93□□□□□ -0.34
Shmt2Q9CZN7 Gm5425-201ENSMUST00000214125 459 ntBASIC12.93□□□□□ -0.34
Shmt2Q9CZN7 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Shmt2Q9CZN7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt2Q9CZN7 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Shmt2Q9CZN7 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
Shmt2Q9CZN7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms