Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Gm18889-201ENSMUST00000174284 929 ntBASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Gm4804-201ENSMUST00000182234 999 ntBASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ssu72Q9CY97 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.42□□□□□ -0.26
Ssu72Q9CY97 AC154532.1-201ENSMUST00000227860 965 ntBASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Gm10175-201ENSMUST00000086013 645 ntBASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ssu72Q9CY97 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Gm6912-201ENSMUST00000117218 544 ntBASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Gm5425-201ENSMUST00000214125 459 ntBASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ssu72Q9CY97 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms