Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.93■□□□□ 0.14
Smc3Q9CW03 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Smc3Q9CW03 Gm10766-202ENSMUST00000194123 606 ntBASIC15.93■□□□□ 0.14
Smc3Q9CW03 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.93■□□□□ 0.14
Smc3Q9CW03 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Smc3Q9CW03 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Smc3Q9CW03 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.93■□□□□ 0.14
Smc3Q9CW03 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smc3Q9CW03 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Smc3Q9CW03 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smc3Q9CW03 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smc3Q9CW03 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Smc3Q9CW03 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smc3Q9CW03 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Smc3Q9CW03 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Smc3Q9CW03 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.93■□□□□ 0.14
Smc3Q9CW03 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smc3Q9CW03 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.93■□□□□ 0.14
Smc3Q9CW03 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smc3Q9CW03 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Smc3Q9CW03 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.92■□□□□ 0.14
Smc3Q9CW03 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.92■□□□□ 0.14
Smc3Q9CW03 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.92■□□□□ 0.14
Smc3Q9CW03 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.92■□□□□ 0.14
Smc3Q9CW03 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.92■□□□□ 0.14
Smc3Q9CW03 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smc3Q9CW03 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.91■□□□□ 0.14
Smc3Q9CW03 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.91■□□□□ 0.14
Smc3Q9CW03 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Gm24420-201ENSMUST00000176676 59 ntBASIC15.91■□□□□ 0.14
Smc3Q9CW03 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc3Q9CW03 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Gm8396-201ENSMUST00000057361 823 ntBASIC15.91■□□□□ 0.14
Smc3Q9CW03 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.91■□□□□ 0.14
Smc3Q9CW03 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc3Q9CW03 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc3Q9CW03 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Gm12585-201ENSMUST00000117307 290 ntBASIC15.9■□□□□ 0.14
Smc3Q9CW03 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Gm25948-201ENSMUST00000175334 112 ntBASIC15.9■□□□□ 0.14
Smc3Q9CW03 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Gm27702-201ENSMUST00000184512 56 ntBASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms