Protein–RNA interactions for Protein: Q9CQC3

Protein C9orf135 homolog, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQC3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q9CQC3 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.04□□□□□ -0.16
Q9CQC3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q9CQC3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q9CQC3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q9CQC3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Q9CQC3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q9CQC3 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q9CQC3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q9CQC3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q9CQC3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Q9CQC3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q9CQC3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.03□□□□□ -0.16
Q9CQC3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Q9CQC3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q9CQC3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q9CQC3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q9CQC3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q9CQC3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.03□□□□□ -0.16
Q9CQC3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q9CQC3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q9CQC3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q9CQC3 Gm12341-201ENSMUST00000119724 503 ntBASIC14.03□□□□□ -0.16
Q9CQC3 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q9CQC3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.03□□□□□ -0.16
Q9CQC3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Q9CQC3 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.03□□□□□ -0.16
Q9CQC3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q9CQC3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q9CQC3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.03□□□□□ -0.16
Q9CQC3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q9CQC3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q9CQC3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q9CQC3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Q9CQC3 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q9CQC3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q9CQC3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q9CQC3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q9CQC3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q9CQC3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q9CQC3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q9CQC3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q9CQC3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Q9CQC3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q9CQC3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q9CQC3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q9CQC3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q9CQC3 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q9CQC3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q9CQC3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q9CQC3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q9CQC3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q9CQC3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Q9CQC3 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.02□□□□□ -0.16
Q9CQC3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q9CQC3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q9CQC3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Q9CQC3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Q9CQC3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Q9CQC3 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Q9CQC3 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.02□□□□□ -0.16
Q9CQC3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Q9CQC3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.02□□□□□ -0.17
Q9CQC3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.02□□□□□ -0.17
Q9CQC3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Q9CQC3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Q9CQC3 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.02□□□□□ -0.17
Q9CQC3 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.02□□□□□ -0.17
Q9CQC3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q9CQC3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q9CQC3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q9CQC3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.02□□□□□ -0.17
Q9CQC3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q9CQC3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Q9CQC3 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.02□□□□□ -0.17
Q9CQC3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q9CQC3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.02□□□□□ -0.17
Q9CQC3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Q9CQC3 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.02□□□□□ -0.17
Q9CQC3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q9CQC3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Q9CQC3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.01□□□□□ -0.17
Q9CQC3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Q9CQC3 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Q9CQC3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Q9CQC3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q9CQC3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q9CQC3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Q9CQC3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q9CQC3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q9CQC3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Q9CQC3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q9CQC3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Q9CQC3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.01□□□□□ -0.17
Q9CQC3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q9CQC3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q9CQC3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Q9CQC3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q9CQC3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q9CQC3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms