Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim11Q99PQ2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Gm42790-201ENSMUST00000201268 969 ntBASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim11Q99PQ2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Gm17795-201ENSMUST00000214505 757 ntBASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim11Q99PQ2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 AC161252.3-201ENSMUST00000225465 1549 ntBASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Trim11Q99PQ2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms