Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gm4935-201ENSMUST00000221316 1198 ntBASIC16.63■□□□□ 0.25
Trim34aQ99PP6 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.63■□□□□ 0.25
Trim34aQ99PP6 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trim34aQ99PP6 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.63■□□□□ 0.25
Trim34aQ99PP6 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim34aQ99PP6 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim34aQ99PP6 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trim34aQ99PP6 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim34aQ99PP6 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim34aQ99PP6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Trim34aQ99PP6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trim34aQ99PP6 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim34aQ99PP6 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim34aQ99PP6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim34aQ99PP6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trim34aQ99PP6 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim34aQ99PP6 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Trim34aQ99PP6 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim34aQ99PP6 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC16.62■□□□□ 0.25
Trim34aQ99PP6 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim34aQ99PP6 Gm44364-201ENSMUST00000198368 141 ntBASIC16.62■□□□□ 0.25
Trim34aQ99PP6 AC154462.2-201ENSMUST00000227519 370 ntBASIC16.62■□□□□ 0.25
Trim34aQ99PP6 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim34aQ99PP6 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trim34aQ99PP6 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Trim34aQ99PP6 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim34aQ99PP6 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim34aQ99PP6 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trim34aQ99PP6 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Gm8805-201ENSMUST00000117848 313 ntBASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Gm6447-201ENSMUST00000118905 835 ntBASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Gm13350-201ENSMUST00000120519 479 ntBASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Gm13342-201ENSMUST00000121055 207 ntBASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Gm7783-201ENSMUST00000204795 781 ntBASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim34aQ99PP6 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Gm27243-201ENSMUST00000183964 521 ntBASIC16.6■□□□□ 0.25
Trim34aQ99PP6 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Gm5850-201ENSMUST00000192923 1206 ntBASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim34aQ99PP6 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim34aQ99PP6 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC16.59■□□□□ 0.25
Trim34aQ99PP6 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim34aQ99PP6 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms