Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tlr3Q99MB1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.55□□□□□ -0.08
Tlr3Q99MB1 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Tlr3Q99MB1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Tlr3Q99MB1 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tlr3Q99MB1 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tlr3Q99MB1 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tlr3Q99MB1 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Tlr3Q99MB1 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Gm12138-201ENSMUST00000122180 951 ntBASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Gm43094-201ENSMUST00000196549 921 ntBASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tlr3Q99MB1 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.53□□□□□ -0.08
Tlr3Q99MB1 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Gm45668-201ENSMUST00000211271 493 ntBASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.53□□□□□ -0.08
Tlr3Q99MB1 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Tlr3Q99MB1 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tlr3Q99MB1 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.52□□□□□ -0.08
Tlr3Q99MB1 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tlr3Q99MB1 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Tlr3Q99MB1 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tlr3Q99MB1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tlr3Q99MB1 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.52□□□□□ -0.09
Tlr3Q99MB1 Gm12485-201ENSMUST00000119641 291 ntBASIC14.52□□□□□ -0.09
Tlr3Q99MB1 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.52□□□□□ -0.09
Tlr3Q99MB1 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tlr3Q99MB1 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.52□□□□□ -0.09
Tlr3Q99MB1 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.52□□□□□ -0.09
Tlr3Q99MB1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tlr3Q99MB1 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tlr3Q99MB1 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tlr3Q99MB1 Gm17330-201ENSMUST00000221047 165 ntBASIC14.52□□□□□ -0.09
Tlr3Q99MB1 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tlr3Q99MB1 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tlr3Q99MB1 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Tlr3Q99MB1 Gm24447-201ENSMUST00000083977 338 ntBASIC14.52□□□□□ -0.09
Tlr3Q99MB1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms