Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Gm6222-202ENSMUST00000182143 629 ntBASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Gm17330-201ENSMUST00000221047 165 ntBASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Gm12176-201ENSMUST00000121420 875 ntBASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Gm38158-201ENSMUST00000194617 339 ntBASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx6-1Q99MA9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Gm4986-201ENSMUST00000119731 549 ntBASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Rps4l-202ENSMUST00000204242 789 ntBASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Efs-202ENSMUST00000227037 2540 ntBASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms