Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Gm43575-201ENSMUST00000196420 516 ntBASIC13.64□□□□□ -0.23
Cdk9Q99J95 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.64□□□□□ -0.23
Cdk9Q99J95 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.64□□□□□ -0.23
Cdk9Q99J95 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk9Q99J95 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cdk9Q99J95 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Gm6973-201ENSMUST00000117080 721 ntBASIC13.63□□□□□ -0.23
Cdk9Q99J95 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.63□□□□□ -0.23
Cdk9Q99J95 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Rpph1-201ENSMUST00000175096 319 ntBASIC13.63□□□□□ -0.23
Cdk9Q99J95 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.63□□□□□ -0.23
Cdk9Q99J95 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk9Q99J95 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.62□□□□□ -0.23
Cdk9Q99J95 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Gm15427-201ENSMUST00000117288 531 ntBASIC13.62□□□□□ -0.23
Cdk9Q99J95 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.62□□□□□ -0.23
Cdk9Q99J95 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.62□□□□□ -0.23
Cdk9Q99J95 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cdk9Q99J95 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdk9Q99J95 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.62□□□□□ -0.23
Cdk9Q99J95 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk9Q99J95 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk9Q99J95 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms