Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Gm19078-201ENSMUST00000206311 727 ntBASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Gm18041-201ENSMUST00000218210 618 ntBASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb1Q91Y08 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Gm11524-201ENSMUST00000119349 807 ntBASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Grk6-205ENSMUST00000224653 2976 ntBASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb1Q91Y08 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Gm26464-201ENSMUST00000157094 305 ntBASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb1Q91Y08 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb1Q91Y08 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms