Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb3Q91XZ7 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Gm18737-201ENSMUST00000173594 937 ntBASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Gm18057-201ENSMUST00000208220 503 ntBASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Gm17917-201ENSMUST00000218561 953 ntBASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb3Q91XZ7 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Gm13616-201ENSMUST00000120600 222 ntBASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Gm43474-201ENSMUST00000196415 774 ntBASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhb3Q91XZ7 Gm9182-201ENSMUST00000217829 639 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms