Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Gm22175-201ENSMUST00000175007 78 ntBASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Gm27618-201ENSMUST00000183671 60 ntBASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Gm21470-201ENSMUST00000187680 696 ntBASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb4Q91XZ6 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Gm38294-201ENSMUST00000192831 381 ntBASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb4Q91XZ6 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Mir698-201ENSMUST00000102164 109 ntBASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb4Q91XZ6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms