Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb5Q91XZ5 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb5Q91XZ5 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb5Q91XZ5 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.9■□□□□ 0.14
Pcdhb5Q91XZ5 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb5Q91XZ5 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb5Q91XZ5 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb5Q91XZ5 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.9■□□□□ 0.14
Pcdhb5Q91XZ5 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Gm14723-201ENSMUST00000118686 215 ntBASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Gm6447-201ENSMUST00000118905 835 ntBASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Gm25927-201ENSMUST00000175058 117 ntBASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Gm27501-201ENSMUST00000183599 107 ntBASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Gm44069-201ENSMUST00000204898 506 ntBASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb5Q91XZ5 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Gm16202-201ENSMUST00000117532 544 ntBASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Gm27516-201ENSMUST00000184237 98 ntBASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Gm9257-201ENSMUST00000221254 232 ntBASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Gm45930-201ENSMUST00000221330 292 ntBASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb5Q91XZ5 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Gm2231-201ENSMUST00000125661 612 ntBASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Gm25261-201ENSMUST00000157416 134 ntBASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Mir8109-201ENSMUST00000184375 117 ntBASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Gm38266-201ENSMUST00000194931 421 ntBASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Gm43118-201ENSMUST00000199149 775 ntBASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb5Q91XZ5 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms