Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tram1Q91V04 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tram1Q91V04 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tram1Q91V04 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tram1Q91V04 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Tram1Q91V04 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.64□□□□□ -0.55
Tram1Q91V04 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tram1Q91V04 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tram1Q91V04 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Tram1Q91V04 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Tram1Q91V04 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tram1Q91V04 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tram1Q91V04 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Tram1Q91V04 Gm9385-201ENSMUST00000117563 472 ntBASIC11.64□□□□□ -0.55
Tram1Q91V04 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.64□□□□□ -0.55
Tram1Q91V04 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.64□□□□□ -0.55
Tram1Q91V04 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.64□□□□□ -0.55
Tram1Q91V04 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tram1Q91V04 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tram1Q91V04 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tram1Q91V04 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Tram1Q91V04 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tram1Q91V04 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tram1Q91V04 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tram1Q91V04 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.64□□□□□ -0.55
Tram1Q91V04 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tram1Q91V04 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tram1Q91V04 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tram1Q91V04 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tram1Q91V04 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Tram1Q91V04 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Tram1Q91V04 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tram1Q91V04 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.63□□□□□ -0.55
Tram1Q91V04 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Tram1Q91V04 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Tram1Q91V04 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Tram1Q91V04 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.63□□□□□ -0.55
Tram1Q91V04 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.63□□□□□ -0.55
Tram1Q91V04 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Mir698-201ENSMUST00000102164 109 ntBASIC11.63□□□□□ -0.55
Tram1Q91V04 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Tram1Q91V04 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.63□□□□□ -0.55
Tram1Q91V04 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.63□□□□□ -0.55
Tram1Q91V04 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Tram1Q91V04 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.63□□□□□ -0.55
Tram1Q91V04 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.63□□□□□ -0.55
Tram1Q91V04 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.63□□□□□ -0.55
Tram1Q91V04 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Tram1Q91V04 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Tram1Q91V04 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Tram1Q91V04 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.63□□□□□ -0.55
Tram1Q91V04 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.63□□□□□ -0.55
Tram1Q91V04 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.63□□□□□ -0.55
Tram1Q91V04 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.63□□□□□ -0.55
Tram1Q91V04 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Tram1Q91V04 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.63□□□□□ -0.55
Tram1Q91V04 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.63□□□□□ -0.55
Tram1Q91V04 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tram1Q91V04 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tram1Q91V04 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tram1Q91V04 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tram1Q91V04 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.62□□□□□ -0.55
Tram1Q91V04 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tram1Q91V04 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tram1Q91V04 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tram1Q91V04 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tram1Q91V04 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Tram1Q91V04 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Tram1Q91V04 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tram1Q91V04 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.62□□□□□ -0.55
Tram1Q91V04 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tram1Q91V04 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tram1Q91V04 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tram1Q91V04 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms