Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Gm45384-201ENSMUST00000210451 277 ntBASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rprd1aQ8VDS4 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Gm27701-201ENSMUST00000184498 110 ntBASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Gm5161-201ENSMUST00000075243 853 ntBASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rprd1aQ8VDS4 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Gm5745-201ENSMUST00000183748 313 ntBASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Gm28911-201ENSMUST00000188837 117 ntBASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.93□□□□□ -0.18
Rprd1aQ8VDS4 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rprd1aQ8VDS4 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rprd1aQ8VDS4 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rprd1aQ8VDS4 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Rprd1aQ8VDS4 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rprd1aQ8VDS4 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rprd1aQ8VDS4 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.92□□□□□ -0.18
Rprd1aQ8VDS4 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms