Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ndc1Q8VCB1 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Gm4984-201ENSMUST00000115987 360 ntBASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Gm2495-201ENSMUST00000191160 466 ntBASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Matn2-206ENSMUST00000228570 2798 ntBASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ndc1Q8VCB1 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ndc1Q8VCB1 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ndc1Q8VCB1 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ndc1Q8VCB1 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ndc1Q8VCB1 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Ndc1Q8VCB1 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ndc1Q8VCB1 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ndc1Q8VCB1 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ndc1Q8VCB1 Acot6-202ENSMUST00000222921 3622 ntBASIC12.77□□□□□ -0.36
Ndc1Q8VCB1 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Gm13689-201ENSMUST00000119360 685 ntBASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Mir1894-201ENSMUST00000122802 81 ntBASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Gm18062-201ENSMUST00000208020 547 ntBASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Gm18055-201ENSMUST00000208254 547 ntBASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ndc1Q8VCB1 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Gm27839-201ENSMUST00000184242 106 ntBASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Gm44719-201ENSMUST00000206404 149 ntBASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Gm17794-201ENSMUST00000220252 955 ntBASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms