Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
Cd109Q8R422 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cd109Q8R422 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cd109Q8R422 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cd109Q8R422 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC18.98■□□□□ 0.63
Cd109Q8R422 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cd109Q8R422 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cd109Q8R422 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cd109Q8R422 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cd109Q8R422 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd109Q8R422 Gm24255-201ENSMUST00000104481 128 ntBASIC18.98■□□□□ 0.63
Cd109Q8R422 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC18.98■□□□□ 0.63
Cd109Q8R422 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cd109Q8R422 Gm18827-201ENSMUST00000188341 790 ntBASIC18.98■□□□□ 0.63
Cd109Q8R422 Gm7118-201ENSMUST00000200167 1003 ntBASIC18.98■□□□□ 0.63
Cd109Q8R422 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC18.98■□□□□ 0.63
Cd109Q8R422 Gm21769-201ENSMUST00000211922 111 ntBASIC18.98■□□□□ 0.63
Cd109Q8R422 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd109Q8R422 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd109Q8R422 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd109Q8R422 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cd109Q8R422 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Cd109Q8R422 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd109Q8R422 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd109Q8R422 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd109Q8R422 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd109Q8R422 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd109Q8R422 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC18.97■□□□□ 0.63
Cd109Q8R422 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd109Q8R422 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd109Q8R422 AC167013.2-201ENSMUST00000228520 2684 ntBASIC18.97■□□□□ 0.63
Cd109Q8R422 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd109Q8R422 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cd109Q8R422 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd109Q8R422 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd109Q8R422 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Cd109Q8R422 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd109Q8R422 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd109Q8R422 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cd109Q8R422 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC18.97■□□□□ 0.63
Cd109Q8R422 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cd109Q8R422 Gm22121-201ENSMUST00000175148 54 ntBASIC18.97■□□□□ 0.63
Cd109Q8R422 Gm37489-201ENSMUST00000191883 159 ntBASIC18.97■□□□□ 0.63
Cd109Q8R422 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cd109Q8R422 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cd109Q8R422 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd109Q8R422 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cd109Q8R422 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd109Q8R422 Gm28182-201ENSMUST00000188354 2477 ntBASIC18.97■□□□□ 0.63
Cd109Q8R422 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Cd109Q8R422 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Cd109Q8R422 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd109Q8R422 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd109Q8R422 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cd109Q8R422 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Cd109Q8R422 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd109Q8R422 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd109Q8R422 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cd109Q8R422 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd109Q8R422 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd109Q8R422 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd109Q8R422 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cd109Q8R422 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd109Q8R422 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd109Q8R422 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd109Q8R422 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd109Q8R422 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd109Q8R422 Gm15808-201ENSMUST00000119046 604 ntBASIC18.96■□□□□ 0.63
Cd109Q8R422 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cd109Q8R422 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd109Q8R422 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC18.96■□□□□ 0.63
Cd109Q8R422 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Cd109Q8R422 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd109Q8R422 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd109Q8R422 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd109Q8R422 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd109Q8R422 Gm15897-201ENSMUST00000117770 1486 ntBASIC18.96■□□□□ 0.63
Cd109Q8R422 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd109Q8R422 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cd109Q8R422 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd109Q8R422 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd109Q8R422 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd109Q8R422 Gm43056-201ENSMUST00000197865 2791 ntBASIC18.95■□□□□ 0.62
Cd109Q8R422 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd109Q8R422 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC18.95■□□□□ 0.62
Cd109Q8R422 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd109Q8R422 Gm13316-201ENSMUST00000140537 691 ntBASIC18.95■□□□□ 0.62
Cd109Q8R422 AC135669.1-202ENSMUST00000216742 540 ntBASIC18.95■□□□□ 0.62
Cd109Q8R422 AC069562.3-201ENSMUST00000225387 587 ntBASIC18.95■□□□□ 0.62
Cd109Q8R422 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cd109Q8R422 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd109Q8R422 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd109Q8R422 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd109Q8R422 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd109Q8R422 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cd109Q8R422 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd109Q8R422 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd109Q8R422 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd109Q8R422 Gm11964-201ENSMUST00000120982 444 ntBASIC18.94■□□□□ 0.62
Cd109Q8R422 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms