Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sf3a1Q8K4Z5 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Gm7063-201ENSMUST00000186840 981 ntBASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Gm6180-201ENSMUST00000065243 498 ntBASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sf3a1Q8K4Z5 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 Gm23984-201ENSMUST00000157139 203 ntBASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sf3a1Q8K4Z5 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sf3a1Q8K4Z5 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sf3a1Q8K4Z5 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms