Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx54Q8K4L0 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ddx54Q8K4L0 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx54Q8K4L0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx54Q8K4L0 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.57■□□□□ 0.4
Ddx54Q8K4L0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx54Q8K4L0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx54Q8K4L0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.57■□□□□ 0.4
Ddx54Q8K4L0 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx54Q8K4L0 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx54Q8K4L0 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx54Q8K4L0 AC069562.3-201ENSMUST00000225387 587 ntBASIC17.57■□□□□ 0.4
Ddx54Q8K4L0 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx54Q8K4L0 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC17.57■□□□□ 0.4
Ddx54Q8K4L0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx54Q8K4L0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx54Q8K4L0 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx54Q8K4L0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Ddx54Q8K4L0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx54Q8K4L0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx54Q8K4L0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
Ddx54Q8K4L0 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.57■□□□□ 0.4
Ddx54Q8K4L0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Gm8566-201ENSMUST00000120174 465 ntBASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Gm17208-201ENSMUST00000168388 535 ntBASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Gm25700-201ENSMUST00000177693 110 ntBASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Gm2546-201ENSMUST00000182630 991 ntBASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx54Q8K4L0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Gm13813-201ENSMUST00000120998 787 ntBASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Gm12539-201ENSMUST00000121549 1098 ntBASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Gm14665-201ENSMUST00000122294 557 ntBASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Gm28693-202ENSMUST00000190758 331 ntBASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 CT025694.1-201ENSMUST00000226188 934 ntBASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx54Q8K4L0 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 Gm15547-201ENSMUST00000122152 333 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms