Protein–RNA interactions for Protein: Q8K389

Cdk5rap2, CDK5 regulatory subunit-associated protein 2, mousemouse

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap2Q8K389 Gm22058-201ENSMUST00000083393 310 ntBASIC18.02■□□□□ 0.47
Cdk5rap2Q8K389 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Cdk5rap2Q8K389 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC18.02■□□□□ 0.47
Cdk5rap2Q8K389 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.47
Cdk5rap2Q8K389 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Cdk5rap2Q8K389 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdk5rap2Q8K389 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 Gm13736-201ENSMUST00000119272 253 ntBASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 Gm5597-201ENSMUST00000182353 1193 ntBASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 Mir339-201ENSMUST00000083659 96 ntBASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap2Q8K389 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Gm43399-201ENSMUST00000202546 2374 ntBASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Gm39404-201ENSMUST00000216350 313 ntBASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Gm45242-201ENSMUST00000210666 2129 ntBASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap2Q8K389 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 AC166491.1-201ENSMUST00000227053 2308 ntBASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Gm13665-201ENSMUST00000120830 528 ntBASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 AA914427-201ENSMUST00000193194 1166 ntBASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cdk5rap2Q8K389 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk5rap2Q8K389 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk5rap2Q8K389 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk5rap2Q8K389 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk5rap2Q8K389 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC17.98■□□□□ 0.47
Cdk5rap2Q8K389 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk5rap2Q8K389 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk5rap2Q8K389 Gm12502-201ENSMUST00000120197 444 ntBASIC17.98■□□□□ 0.47
Cdk5rap2Q8K389 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk5rap2Q8K389 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk5rap2Q8K389 AC165260.3-202ENSMUST00000224550 1031 ntBASIC17.98■□□□□ 0.47
Cdk5rap2Q8K389 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms