Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shtn1Q8K2Q9 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shtn1Q8K2Q9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shtn1Q8K2Q9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shtn1Q8K2Q9 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shtn1Q8K2Q9 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.91■□□□□ 0.14
Shtn1Q8K2Q9 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Shtn1Q8K2Q9 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shtn1Q8K2Q9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shtn1Q8K2Q9 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shtn1Q8K2Q9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shtn1Q8K2Q9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Gm13297-201ENSMUST00000120205 934 ntBASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Gm27320-201ENSMUST00000184892 109 ntBASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Shtn1Q8K2Q9 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.14
Shtn1Q8K2Q9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Gm6023-201ENSMUST00000118217 606 ntBASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Gm43068-201ENSMUST00000201095 1273 ntBASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shtn1Q8K2Q9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Shtn1Q8K2Q9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.88■□□□□ 0.13
Shtn1Q8K2Q9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Shtn1Q8K2Q9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shtn1Q8K2Q9 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.88■□□□□ 0.13
Shtn1Q8K2Q9 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shtn1Q8K2Q9 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.88■□□□□ 0.13
Shtn1Q8K2Q9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shtn1Q8K2Q9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Shtn1Q8K2Q9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Shtn1Q8K2Q9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shtn1Q8K2Q9 Gm15770-201ENSMUST00000117498 584 ntBASIC15.88■□□□□ 0.13
Shtn1Q8K2Q9 Gm8805-201ENSMUST00000117848 313 ntBASIC15.88■□□□□ 0.13
Shtn1Q8K2Q9 Gm14381-201ENSMUST00000122105 414 ntBASIC15.88■□□□□ 0.13
Shtn1Q8K2Q9 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC15.88■□□□□ 0.13
Shtn1Q8K2Q9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms