Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.85□□□□□ -0.19
CopaQ8CIE6 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CopaQ8CIE6 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CopaQ8CIE6 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CopaQ8CIE6 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CopaQ8CIE6 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CopaQ8CIE6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CopaQ8CIE6 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CopaQ8CIE6 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CopaQ8CIE6 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CopaQ8CIE6 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CopaQ8CIE6 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CopaQ8CIE6 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CopaQ8CIE6 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.85□□□□□ -0.19
CopaQ8CIE6 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CopaQ8CIE6 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CopaQ8CIE6 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.84□□□□□ -0.19
CopaQ8CIE6 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Mir6392-201ENSMUST00000184924 108 ntBASIC13.84□□□□□ -0.19
CopaQ8CIE6 Gm45384-201ENSMUST00000210451 277 ntBASIC13.84□□□□□ -0.19
CopaQ8CIE6 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.84□□□□□ -0.19
CopaQ8CIE6 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.84□□□□□ -0.19
CopaQ8CIE6 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CopaQ8CIE6 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CopaQ8CIE6 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CopaQ8CIE6 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.83□□□□□ -0.2
CopaQ8CIE6 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.83□□□□□ -0.2
CopaQ8CIE6 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Gm19220-201ENSMUST00000222682 803 ntBASIC13.83□□□□□ -0.2
CopaQ8CIE6 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CopaQ8CIE6 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CopaQ8CIE6 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.82□□□□□ -0.2
CopaQ8CIE6 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.82□□□□□ -0.2
CopaQ8CIE6 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms