Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clip4Q8CI96 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Clip4Q8CI96 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clip4Q8CI96 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Clip4Q8CI96 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clip4Q8CI96 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clip4Q8CI96 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clip4Q8CI96 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clip4Q8CI96 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clip4Q8CI96 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Clip4Q8CI96 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clip4Q8CI96 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clip4Q8CI96 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clip4Q8CI96 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clip4Q8CI96 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Clip4Q8CI96 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.66□□□□□ -0.22
Clip4Q8CI96 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.66□□□□□ -0.22
Clip4Q8CI96 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Clip4Q8CI96 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.66□□□□□ -0.22
Clip4Q8CI96 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clip4Q8CI96 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clip4Q8CI96 Gm20445-201ENSMUST00000061905 565 ntBASIC13.66□□□□□ -0.22
Clip4Q8CI96 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.66□□□□□ -0.22
Clip4Q8CI96 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clip4Q8CI96 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.66□□□□□ -0.22
Clip4Q8CI96 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Clip4Q8CI96 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clip4Q8CI96 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clip4Q8CI96 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clip4Q8CI96 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clip4Q8CI96 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Clip4Q8CI96 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clip4Q8CI96 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clip4Q8CI96 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clip4Q8CI96 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clip4Q8CI96 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clip4Q8CI96 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clip4Q8CI96 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clip4Q8CI96 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.65□□□□□ -0.22
Clip4Q8CI96 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.65□□□□□ -0.22
Clip4Q8CI96 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clip4Q8CI96 Gm44855-201ENSMUST00000205725 362 ntBASIC13.65□□□□□ -0.22
Clip4Q8CI96 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clip4Q8CI96 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.65□□□□□ -0.22
Clip4Q8CI96 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clip4Q8CI96 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clip4Q8CI96 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Clip4Q8CI96 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Clip4Q8CI96 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clip4Q8CI96 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clip4Q8CI96 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clip4Q8CI96 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clip4Q8CI96 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clip4Q8CI96 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clip4Q8CI96 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.64□□□□□ -0.23
Clip4Q8CI96 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Syt7-205ENSMUST00000224135 1557 ntBASIC13.64□□□□□ -0.23
Clip4Q8CI96 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.64□□□□□ -0.23
Clip4Q8CI96 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Clip4Q8CI96 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Gm9522-201ENSMUST00000182394 926 ntBASIC13.64□□□□□ -0.23
Clip4Q8CI96 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.64□□□□□ -0.23
Clip4Q8CI96 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.64□□□□□ -0.23
Clip4Q8CI96 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.64□□□□□ -0.23
Clip4Q8CI96 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms