Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Gm6222-201ENSMUST00000120787 396 ntBASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc28bQ8CEG5 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Gm38225-201ENSMUST00000194001 393 ntBASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc28bQ8CEG5 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc28bQ8CEG5 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms