Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc38Q8CDN8 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc38Q8CDN8 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Gm27306-201ENSMUST00000183970 107 ntBASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Gm18905-201ENSMUST00000205454 928 ntBASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.06■□□□□ 0
Ccdc38Q8CDN8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc38Q8CDN8 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.05■□□□□ 0
Ccdc38Q8CDN8 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc38Q8CDN8 AC164702.1-201ENSMUST00000220135 2212 ntBASIC15.05■□□□□ 0
Ccdc38Q8CDN8 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ 0
Ccdc38Q8CDN8 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Ccdc38Q8CDN8 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms