Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Uba3Q8C878 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Uba3Q8C878 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Uba3Q8C878 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Uba3Q8C878 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Uba3Q8C878 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Uba3Q8C878 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
Uba3Q8C878 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.26□□□□□ -0.13
Uba3Q8C878 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.26□□□□□ -0.13
Uba3Q8C878 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Uba3Q8C878 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.26□□□□□ -0.13
Uba3Q8C878 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Uba3Q8C878 Mir7654-201ENSMUST00000185082 70 ntBASIC14.26□□□□□ -0.13
Uba3Q8C878 Gm18018-201ENSMUST00000198273 408 ntBASIC14.26□□□□□ -0.13
Uba3Q8C878 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Uba3Q8C878 Gm6180-201ENSMUST00000065243 498 ntBASIC14.26□□□□□ -0.13
Uba3Q8C878 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Uba3Q8C878 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Uba3Q8C878 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Uba3Q8C878 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Uba3Q8C878 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Uba3Q8C878 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Uba3Q8C878 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Uba3Q8C878 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Uba3Q8C878 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.25□□□□□ -0.13
Uba3Q8C878 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Uba3Q8C878 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.25□□□□□ -0.13
Uba3Q8C878 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Uba3Q8C878 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Uba3Q8C878 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Uba3Q8C878 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Uba3Q8C878 Gm15678-201ENSMUST00000117573 960 ntBASIC14.25□□□□□ -0.13
Uba3Q8C878 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.25□□□□□ -0.13
Uba3Q8C878 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.25□□□□□ -0.13
Uba3Q8C878 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.25□□□□□ -0.13
Uba3Q8C878 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.25□□□□□ -0.13
Uba3Q8C878 Gm12403-201ENSMUST00000121384 959 ntBASIC14.25□□□□□ -0.13
Uba3Q8C878 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.25□□□□□ -0.13
Uba3Q8C878 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.25□□□□□ -0.13
Uba3Q8C878 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.25□□□□□ -0.13
Uba3Q8C878 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.25□□□□□ -0.13
Uba3Q8C878 Gm7063-201ENSMUST00000186840 981 ntBASIC14.25□□□□□ -0.13
Uba3Q8C878 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Uba3Q8C878 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Uba3Q8C878 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.25□□□□□ -0.13
Uba3Q8C878 Gm17330-201ENSMUST00000221047 165 ntBASIC14.25□□□□□ -0.13
Uba3Q8C878 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.25□□□□□ -0.13
Uba3Q8C878 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Uba3Q8C878 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Uba3Q8C878 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Uba3Q8C878 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Uba3Q8C878 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Uba3Q8C878 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.25□□□□□ -0.13
Uba3Q8C878 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Uba3Q8C878 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Uba3Q8C878 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Uba3Q8C878 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Uba3Q8C878 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Uba3Q8C878 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Uba3Q8C878 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Uba3Q8C878 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Uba3Q8C878 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Uba3Q8C878 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Uba3Q8C878 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Uba3Q8C878 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Uba3Q8C878 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Uba3Q8C878 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Uba3Q8C878 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Uba3Q8C878 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Uba3Q8C878 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Uba3Q8C878 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Uba3Q8C878 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Uba3Q8C878 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Uba3Q8C878 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.24□□□□□ -0.13
Uba3Q8C878 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Uba3Q8C878 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.24□□□□□ -0.13
Uba3Q8C878 Gm6745-201ENSMUST00000199216 526 ntBASIC14.24□□□□□ -0.13
Uba3Q8C878 Gm9908-201ENSMUST00000211534 448 ntBASIC14.24□□□□□ -0.13
Uba3Q8C878 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.24□□□□□ -0.13
Uba3Q8C878 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Uba3Q8C878 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.24□□□□□ -0.13
Uba3Q8C878 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Uba3Q8C878 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Uba3Q8C878 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Uba3Q8C878 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Uba3Q8C878 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Uba3Q8C878 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Uba3Q8C878 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Uba3Q8C878 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Uba3Q8C878 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Uba3Q8C878 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Uba3Q8C878 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Uba3Q8C878 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Uba3Q8C878 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Uba3Q8C878 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Uba3Q8C878 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Uba3Q8C878 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Uba3Q8C878 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Uba3Q8C878 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Uba3Q8C878 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms