Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm5641-202ENSMUST00000198699 1080 ntBASIC19.01■□□□□ 0.63
Usp47Q8BY87 Gm45841-201ENSMUST00000207700 164 ntBASIC19.01■□□□□ 0.63
Usp47Q8BY87 AC125350.2-201ENSMUST00000224737 727 ntBASIC19.01■□□□□ 0.63
Usp47Q8BY87 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Usp47Q8BY87 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC19■□□□□ 0.63
Usp47Q8BY87 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Usp47Q8BY87 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC19■□□□□ 0.63
Usp47Q8BY87 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Usp47Q8BY87 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC18.99■□□□□ 0.63
Usp47Q8BY87 Gm7553-201ENSMUST00000185805 1426 ntBASIC18.99■□□□□ 0.63
Usp47Q8BY87 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp47Q8BY87 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Usp47Q8BY87 AC140451.2-201ENSMUST00000228030 664 ntBASIC18.99■□□□□ 0.63
Usp47Q8BY87 Gm16372-201ENSMUST00000073088 450 ntBASIC18.99■□□□□ 0.63
Usp47Q8BY87 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Usp47Q8BY87 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp47Q8BY87 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp47Q8BY87 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp47Q8BY87 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
Usp47Q8BY87 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC18.98■□□□□ 0.63
Usp47Q8BY87 Gm40466-201ENSMUST00000212174 422 ntBASIC18.98■□□□□ 0.63
Usp47Q8BY87 AC153962.4-201ENSMUST00000217878 242 ntBASIC18.98■□□□□ 0.63
Usp47Q8BY87 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp47Q8BY87 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp47Q8BY87 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp47Q8BY87 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Usp47Q8BY87 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp47Q8BY87 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC18.98■□□□□ 0.63
Usp47Q8BY87 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Usp47Q8BY87 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC18.98■□□□□ 0.63
Usp47Q8BY87 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp47Q8BY87 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp47Q8BY87 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp47Q8BY87 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp47Q8BY87 Gm14608-201ENSMUST00000120030 1553 ntBASIC18.98■□□□□ 0.63
Usp47Q8BY87 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp47Q8BY87 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp47Q8BY87 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp47Q8BY87 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC18.97■□□□□ 0.63
Usp47Q8BY87 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC18.97■□□□□ 0.63
Usp47Q8BY87 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC18.97■□□□□ 0.63
Usp47Q8BY87 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp47Q8BY87 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp47Q8BY87 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp47Q8BY87 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp47Q8BY87 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp47Q8BY87 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp47Q8BY87 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Usp47Q8BY87 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Usp47Q8BY87 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Usp47Q8BY87 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC18.97■□□□□ 0.63
Usp47Q8BY87 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms