Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Gm15393-201ENSMUST00000120499 219 ntBASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Gm25144-201ENSMUST00000179561 110 ntBASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Gm25352-201ENSMUST00000179815 110 ntBASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Gm44719-201ENSMUST00000206404 149 ntBASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne3Q8BT60 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cpne3Q8BT60 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.08□□□□□ -0.31
Cpne3Q8BT60 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cpne3Q8BT60 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.08□□□□□ -0.31
Cpne3Q8BT60 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne3Q8BT60 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne3Q8BT60 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne3Q8BT60 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne3Q8BT60 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne3Q8BT60 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Cpne3Q8BT60 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne3Q8BT60 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Cpne3Q8BT60 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne3Q8BT60 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.08□□□□□ -0.32
Cpne3Q8BT60 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne3Q8BT60 Gm22175-201ENSMUST00000175007 78 ntBASIC13.08□□□□□ -0.32
Cpne3Q8BT60 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.08□□□□□ -0.32
Cpne3Q8BT60 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.08□□□□□ -0.32
Cpne3Q8BT60 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne3Q8BT60 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne3Q8BT60 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.08□□□□□ -0.32
Cpne3Q8BT60 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.08□□□□□ -0.32
Cpne3Q8BT60 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cpne3Q8BT60 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne3Q8BT60 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.08□□□□□ -0.32
Cpne3Q8BT60 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne3Q8BT60 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne3Q8BT60 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne3Q8BT60 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne3Q8BT60 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne3Q8BT60 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cpne3Q8BT60 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms