Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Gm6013-201ENSMUST00000212264 699 ntBASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rd3Q8BRE0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.32□□□□□ -0.12
Rd3Q8BRE0 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Gm9823-201ENSMUST00000051212 327 ntBASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rd3Q8BRE0 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Gm19184-201ENSMUST00000196798 928 ntBASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rd3Q8BRE0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms