Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sfr1Q8BP27 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Sfr1Q8BP27 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sfr1Q8BP27 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sfr1Q8BP27 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sfr1Q8BP27 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Gm37917-201ENSMUST00000194711 392 ntBASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sfr1Q8BP27 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sfr1Q8BP27 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
Sfr1Q8BP27 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.8□□□□□ -0.2
Sfr1Q8BP27 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Sfr1Q8BP27 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sfr1Q8BP27 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sfr1Q8BP27 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sfr1Q8BP27 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sfr1Q8BP27 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sfr1Q8BP27 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sfr1Q8BP27 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sfr1Q8BP27 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sfr1Q8BP27 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sfr1Q8BP27 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sfr1Q8BP27 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sfr1Q8BP27 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms