Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srrm4Q8BKA3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srrm4Q8BKA3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Srrm4Q8BKA3 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Srrm4Q8BKA3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.75□□□□□ -0.53
Srrm4Q8BKA3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.75□□□□□ -0.53
Srrm4Q8BKA3 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srrm4Q8BKA3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srrm4Q8BKA3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srrm4Q8BKA3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Srrm4Q8BKA3 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Gm45668-201ENSMUST00000211271 493 ntBASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Gm15823-201ENSMUST00000064305 670 ntBASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srrm4Q8BKA3 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Gm14928-201ENSMUST00000120198 477 ntBASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Gm27772-201ENSMUST00000184900 187 ntBASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Gm43094-201ENSMUST00000196549 921 ntBASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Gm18624-201ENSMUST00000220966 658 ntBASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srrm4Q8BKA3 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms