Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
SynbQ8BI41 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SynbQ8BI41 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SynbQ8BI41 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SynbQ8BI41 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.96□□□□□ -0.33
SynbQ8BI41 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SynbQ8BI41 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SynbQ8BI41 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SynbQ8BI41 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SynbQ8BI41 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SynbQ8BI41 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SynbQ8BI41 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.96□□□□□ -0.33
SynbQ8BI41 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.96□□□□□ -0.33
SynbQ8BI41 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SynbQ8BI41 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.96□□□□□ -0.33
SynbQ8BI41 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SynbQ8BI41 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SynbQ8BI41 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SynbQ8BI41 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.96□□□□□ -0.33
SynbQ8BI41 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SynbQ8BI41 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SynbQ8BI41 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
SynbQ8BI41 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SynbQ8BI41 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.96□□□□□ -0.34
SynbQ8BI41 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SynbQ8BI41 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SynbQ8BI41 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
SynbQ8BI41 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SynbQ8BI41 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SynbQ8BI41 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SynbQ8BI41 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SynbQ8BI41 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SynbQ8BI41 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SynbQ8BI41 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.95□□□□□ -0.34
SynbQ8BI41 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SynbQ8BI41 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SynbQ8BI41 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.95□□□□□ -0.34
SynbQ8BI41 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SynbQ8BI41 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.95□□□□□ -0.34
SynbQ8BI41 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SynbQ8BI41 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SynbQ8BI41 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SynbQ8BI41 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SynbQ8BI41 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SynbQ8BI41 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SynbQ8BI41 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SynbQ8BI41 Gm12390-201ENSMUST00000117897 397 ntBASIC12.95□□□□□ -0.34
SynbQ8BI41 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.95□□□□□ -0.34
SynbQ8BI41 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.95□□□□□ -0.34
SynbQ8BI41 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SynbQ8BI41 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.95□□□□□ -0.34
SynbQ8BI41 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.95□□□□□ -0.34
SynbQ8BI41 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.95□□□□□ -0.34
SynbQ8BI41 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.95□□□□□ -0.34
SynbQ8BI41 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SynbQ8BI41 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SynbQ8BI41 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SynbQ8BI41 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SynbQ8BI41 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SynbQ8BI41 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SynbQ8BI41 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SynbQ8BI41 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SynbQ8BI41 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SynbQ8BI41 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.95□□□□□ -0.34
SynbQ8BI41 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SynbQ8BI41 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.95□□□□□ -0.34
SynbQ8BI41 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SynbQ8BI41 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SynbQ8BI41 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SynbQ8BI41 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SynbQ8BI41 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SynbQ8BI41 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SynbQ8BI41 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SynbQ8BI41 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SynbQ8BI41 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SynbQ8BI41 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SynbQ8BI41 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SynbQ8BI41 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SynbQ8BI41 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.94□□□□□ -0.34
SynbQ8BI41 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.94□□□□□ -0.34
SynbQ8BI41 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.94□□□□□ -0.34
SynbQ8BI41 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SynbQ8BI41 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SynbQ8BI41 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.94□□□□□ -0.34
SynbQ8BI41 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
SynbQ8BI41 Gm27839-201ENSMUST00000184242 106 ntBASIC12.94□□□□□ -0.34
SynbQ8BI41 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.94□□□□□ -0.34
SynbQ8BI41 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SynbQ8BI41 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SynbQ8BI41 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.94□□□□□ -0.34
SynbQ8BI41 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.94□□□□□ -0.34
SynbQ8BI41 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SynbQ8BI41 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SynbQ8BI41 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SynbQ8BI41 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SynbQ8BI41 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.94□□□□□ -0.34
SynbQ8BI41 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SynbQ8BI41 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.94□□□□□ -0.34
SynbQ8BI41 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.94□□□□□ -0.34
SynbQ8BI41 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms